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    PDB 1el7-4fon
      1el7
      1tdr
      3fa1
      3k18
      3kq8
      3l1k
      4fon

Tellurium in the structure of 5-Te-Uridine Derivatized Dna-8MER (pdb 3kq8)






The binding sites of Tellurium atom in the structure of 5-Te-Uridine Derivatized Dna-8MER (pdb code 3kq8). This binding sites where shown with 5.0 Angstroms radius around Tellurium atom.
The 3kq8 structure was solved by J.SHENG, A.E.A.HASSAN, W.ZHANG, Z.HUANG, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)29.9-1.6
Space groupP43212
a (A)42.242
b (A)42.242
c (A)23.929
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)18.6
Rfree (%)22.9


Tellurium Binding Sites:

Tellurium binding site 1 out of 1 in 3kq8


Tellurium binding site 1 out of 1 in 3kq8
Click to enlarge
stereopicture of Tellurium binding site 1 out of 1 in 3kq8
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Tellurium in the PDB 3kq8. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tellurium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Dg3, A: Tti4, A: Hoh28, A: Hoh35, A: Hoh36, A: Hoh45,

conact list:


AtomAtomDistance (A)
TeN9 A:Dg33.74
TeN3 A:Dg34.70
TeC3' A:Dg33.95
TeC8 A:Dg33.49
TeC6 A:Dg34.50
TeC5 A:Dg33.76
TeC1' A:Dg34.48
TeN7 A:Dg33.53
TeO3' A:Dg34.66
TeO4' A:Dg34.98
TeC4 A:Dg33.90
TeC2' A:Dg34.11
TeN3 A:Tti44.33
TeTE5 A:Tti40.00
TeC2 A:Tti44.89
TeC6 A:Tti42.99
TeN1 A:Tti44.31
TeC5 A:Tti42.08
TeP A:Tti44.42
TeC4 A:Tti43.08
TeO1P A:Tti43.42
TeO5' A:Tti44.42
TeO4 A:Tti43.27
TeO A:Hoh283.74
TeO A:Hoh352.37
TeO A:Hoh364.75
TeO A:Hoh454.00

interactive model:




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