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Tellurium in PDB 6n90: Yoeb/Pare Toxin From Agrobacterium Tumefaciens

Protein crystallography data

The structure of Yoeb/Pare Toxin From Agrobacterium Tumefaciens, PDB code: 6n90 was solved by C.R.Bourne, E.R.Reddem, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.87 / 1.76
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 30.955, 77.739, 36.350, 90.00, 92.91, 90.00
R / Rfree (%) 21.8 / 24.6

Other elements in 6n90:

The structure of Yoeb/Pare Toxin From Agrobacterium Tumefaciens also contains other interesting chemical elements:

Tungsten (W) 6 atoms

Tellurium Binding Sites:

The binding sites of Tellurium atom in the Yoeb/Pare Toxin From Agrobacterium Tumefaciens (pdb code 6n90). This binding sites where shown within 5.0 Angstroms radius around Tellurium atom.
In total only one binding site of Tellurium was determined in the Yoeb/Pare Toxin From Agrobacterium Tumefaciens, PDB code: 6n90:

Tellurium binding site 1 out of 1 in 6n90

Go back to Tellurium Binding Sites List in 6n90
Tellurium binding site 1 out of 1 in the Yoeb/Pare Toxin From Agrobacterium Tumefaciens


Mono view


Stereo pair view

A full contact list of Tellurium with other atoms in the Te binding site number 1 of Yoeb/Pare Toxin From Agrobacterium Tumefaciens within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Te101

b:29.5
occ:0.60
TE1 B:TEW101 0.0 29.5 0.6
O11 B:TEW101 1.9 30.7 0.6
O7 B:TEW101 1.9 25.0 0.6
O1 B:TEW101 1.9 31.9 0.6
O13 B:TEW101 1.9 30.4 0.6
O12 B:TEW101 1.9 30.6 0.6
O2 B:TEW101 2.0 30.2 0.6
W2 B:TEW101 3.2 27.3 0.6
W1 B:TEW101 3.2 27.2 0.6
W6 B:TEW101 3.3 32.7 0.6
W4 B:TEW101 3.3 28.6 0.6
W5 B:TEW101 3.3 31.3 0.6
W3 B:TEW101 3.3 31.0 0.6
O10 B:TEW101 3.3 29.9 0.6
O3 B:TEW101 3.4 27.4 0.6
O4 B:TEW101 3.4 28.4 0.6
O14 B:TEW101 3.4 29.7 0.6
O17 B:TEW101 3.4 28.9 0.6
O20 B:TEW101 3.4 32.6 0.6
NH1 B:ARG78 4.0 44.4 1.0
N B:GLY72 4.4 36.5 1.0
O8 B:TEW101 4.4 29.7 0.6
O6 B:TEW101 4.4 29.1 0.6
O B:HOH206 4.4 28.1 1.0
O9 B:TEW101 4.5 21.2 0.6
O5 B:TEW101 4.5 31.3 0.6
O19 B:TEW101 4.5 24.3 0.6
O22 B:TEW101 4.5 33.0 0.6
O23 B:TEW101 4.5 32.8 0.6
O16 B:TEW101 4.5 31.5 0.6
O21 B:TEW101 4.6 30.4 0.6
O31 B:TEW101 4.6 29.7 0.6
O18 B:TEW101 4.6 31.2 0.6
O15 B:TEW101 4.6 32.2 0.6
CB B:SER71 4.7 37.2 1.0
CA B:GLY72 4.9 38.2 1.0
CZ B:ARG78 5.0 45.5 1.0

Reference:

J.Mcgillick, J.R.Ames, T.Murphy, E.Reddem, C.R.Bourne. Yoeb/Pare Toxin From Agrobacterium Tumefaciens Biorxiv 2019.
DOI: 10.1101/795211
Page generated: Wed Dec 16 02:27:39 2020

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