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Tellurium in PDB 7rcj: Crystal Structure of Znua From Citrobacter Koseri

Protein crystallography data

The structure of Crystal Structure of Znua From Citrobacter Koseri, PDB code: 7rcj was solved by E.T.Yukl, E.L.Yekwa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.47 / 3.15
Space group P 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 122.246, 81.667, 126.555, 90, 112.99, 90
R / Rfree (%) 21.7 / 25.4

Other elements in 7rcj:

The structure of Crystal Structure of Znua From Citrobacter Koseri also contains other interesting chemical elements:

Tungsten (W) 18 atoms
Zinc (Zn) 6 atoms

Tellurium Binding Sites:

The binding sites of Tellurium atom in the Crystal Structure of Znua From Citrobacter Koseri (pdb code 7rcj). This binding sites where shown within 5.0 Angstroms radius around Tellurium atom.
In total 3 binding sites of Tellurium where determined in the Crystal Structure of Znua From Citrobacter Koseri, PDB code: 7rcj:
Jump to Tellurium binding site number: 1; 2; 3;

Tellurium binding site 1 out of 3 in 7rcj

Go back to Tellurium Binding Sites List in 7rcj
Tellurium binding site 1 out of 3 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tellurium with other atoms in the Te binding site number 1 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Te402

b:382.2
occ:0.25
TE1 B:TEW402 0.0 382.2 0.2
O1 B:TEW402 1.9 356.5 0.2
O11 B:TEW402 1.9 350.4 0.2
O2 B:TEW402 1.9 353.6 0.2
O13 B:TEW402 1.9 349.6 0.2
O12 B:TEW402 1.9 353.9 0.2
O7 B:TEW402 2.0 356.1 0.2
W1 B:TEW402 3.3 346.3 0.2
W6 B:TEW402 3.3 332.5 0.2
W3 B:TEW402 3.3 333.6 0.2
W5 B:TEW402 3.3 333.2 0.2
W2 B:TEW402 3.3 347.0 0.2
O4 B:TEW402 3.4 344.2 0.2
W4 B:TEW402 3.4 344.9 0.2
O20 B:TEW402 3.4 337.8 0.2
O14 B:TEW402 3.4 332.9 0.2
O3 B:TEW402 3.4 350.7 0.2
O17 B:TEW402 3.5 343.4 0.2
O10 B:TEW402 3.5 346.1 0.2
O6 B:TEW402 4.5 350.1 0.2
O16 B:TEW402 4.5 327.3 0.2
O23 B:TEW402 4.5 333.0 0.2
O5 B:TEW402 4.5 344.5 0.2
O22 B:TEW402 4.5 337.8 0.2
O15 B:TEW402 4.6 332.0 0.2
O31 B:TEW402 4.6 324.7 0.2
O21 B:TEW402 4.6 337.4 0.2
O8 B:TEW402 4.6 345.1 0.2
O19 B:TEW402 4.6 341.8 0.2
O9 B:TEW402 4.6 335.9 0.2
O18 B:TEW402 4.7 338.9 0.2

Tellurium binding site 2 out of 3 in 7rcj

Go back to Tellurium Binding Sites List in 7rcj
Tellurium binding site 2 out of 3 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tellurium with other atoms in the Te binding site number 2 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Te402

b:370.5
occ:0.25
TE1 D:TEW402 0.0 370.5 0.2
O11 D:TEW402 1.9 342.9 0.2
O13 D:TEW402 1.9 340.7 0.2
O1 D:TEW402 1.9 351.1 0.2
O12 D:TEW402 1.9 343.1 0.2
O2 D:TEW402 1.9 345.0 0.2
O7 D:TEW402 2.0 349.9 0.2
W6 D:TEW402 3.3 329.9 0.2
W5 D:TEW402 3.3 334.2 0.2
W3 D:TEW402 3.3 320.4 0.2
W1 D:TEW402 3.3 339.9 0.2
W4 D:TEW402 3.3 326.4 0.2
W2 D:TEW402 3.4 346.7 0.2
O20 D:TEW402 3.4 335.8 0.2
O14 D:TEW402 3.4 326.1 0.2
O17 D:TEW402 3.4 332.5 0.2
O4 D:TEW402 3.5 338.6 0.2
O10 D:TEW402 3.5 341.1 0.2
O3 D:TEW402 3.5 342.9 0.2
O23 D:TEW402 4.5 328.8 0.2
O22 D:TEW402 4.5 331.6 0.2
O31 D:TEW402 4.5 324.7 0.2
O21 D:TEW402 4.6 333.4 0.2
O16 D:TEW402 4.6 312.5 0.2
O19 D:TEW402 4.6 326.5 0.2
O6 D:TEW402 4.6 332.5 0.2
O8 D:TEW402 4.6 338.1 0.2
O15 D:TEW402 4.6 317.0 0.2
O5 D:TEW402 4.6 335.0 0.2
O18 D:TEW402 4.6 325.3 0.2
O9 D:TEW402 4.7 347.0 0.2

Tellurium binding site 3 out of 3 in 7rcj

Go back to Tellurium Binding Sites List in 7rcj
Tellurium binding site 3 out of 3 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tellurium with other atoms in the Te binding site number 3 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Te402

b:434.7
occ:0.25
TE1 F:TEW402 0.0 434.7 0.2
O1 F:TEW402 1.9 406.0 0.2
O2 F:TEW402 1.9 414.1 0.2
O13 F:TEW402 1.9 397.5 0.2
O11 F:TEW402 1.9 390.2 0.2
O7 F:TEW402 1.9 391.5 0.2
O12 F:TEW402 2.0 392.1 0.2
W1 F:TEW402 3.3 427.0 0.2
W3 F:TEW402 3.3 400.3 0.2
W2 F:TEW402 3.3 369.8 0.2
W6 F:TEW402 3.3 355.2 0.2
W5 F:TEW402 3.4 376.0 0.2
W4 F:TEW402 3.4 369.3 0.2
O4 F:TEW402 3.4 411.4 0.2
O14 F:TEW402 3.4 379.1 0.2
O3 F:TEW402 3.4 399.2 0.2
O20 F:TEW402 3.4 368.8 0.2
O10 F:TEW402 3.4 374.5 0.2
O17 F:TEW402 3.5 374.6 0.2
O6 F:TEW402 4.5 396.5 0.2
O8 F:TEW402 4.5 368.1 0.2
O16 F:TEW402 4.6 396.3 0.2
O23 F:TEW402 4.6 365.4 0.2
O5 F:TEW402 4.6 411.6 0.2
O15 F:TEW402 4.6 381.2 0.2
O31 F:TEW402 4.6 357.1 0.2
O9 F:TEW402 4.6 367.5 0.2
O19 F:TEW402 4.6 362.0 0.2
O22 F:TEW402 4.6 365.8 0.2
O21 F:TEW402 4.6 366.9 0.2
O18 F:TEW402 4.7 365.5 0.2
NZ F:LYS91 4.9 200.6 1.0

Reference:

E.L.Yekwa, F.A.Serrano, E.Yukl. Conformational Flexibility in the Zinc Solute-Binding Protein Znua. Acta Crystallogr.,Sect.F V. 78 128 2022.
ISSN: ESSN 2053-230X
PubMed: 35234138
DOI: 10.1107/S2053230X22001662
Page generated: Fri Apr 7 20:15:16 2023

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