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Tellurium in PDB 8ysr: Crystal Structure of the Deinococcus Wulumuqiensis Cd-Ntase Dwcdnb in Complex with Hexatungstotellurate(VI) Tew

Protein crystallography data

The structure of Crystal Structure of the Deinococcus Wulumuqiensis Cd-Ntase Dwcdnb in Complex with Hexatungstotellurate(VI) Tew, PDB code: 8ysr was solved by Y.-C.Wang, C.-S.Yang, M.-H.Hou, Y.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.58 / 2.04
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 35.367, 46.798, 60.374, 100.48, 104.89, 100.13
R / Rfree (%) 18.1 / 21.5

Other elements in 8ysr:

The structure of Crystal Structure of the Deinococcus Wulumuqiensis Cd-Ntase Dwcdnb in Complex with Hexatungstotellurate(VI) Tew also contains other interesting chemical elements:

Tungsten (W) 6 atoms

Tellurium Binding Sites:

The binding sites of Tellurium atom in the Crystal Structure of the Deinococcus Wulumuqiensis Cd-Ntase Dwcdnb in Complex with Hexatungstotellurate(VI) Tew (pdb code 8ysr). This binding sites where shown within 5.0 Angstroms radius around Tellurium atom.
In total only one binding site of Tellurium was determined in the Crystal Structure of the Deinococcus Wulumuqiensis Cd-Ntase Dwcdnb in Complex with Hexatungstotellurate(VI) Tew, PDB code: 8ysr:

Tellurium binding site 1 out of 1 in 8ysr

Go back to Tellurium Binding Sites List in 8ysr
Tellurium binding site 1 out of 1 in the Crystal Structure of the Deinococcus Wulumuqiensis Cd-Ntase Dwcdnb in Complex with Hexatungstotellurate(VI) Tew


Mono view


Stereo pair view

A full contact list of Tellurium with other atoms in the Te binding site number 1 of Crystal Structure of the Deinococcus Wulumuqiensis Cd-Ntase Dwcdnb in Complex with Hexatungstotellurate(VI) Tew within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Te401

b:47.9
occ:0.65
TE1 A:TEW401 0.0 47.9 0.7
O7 A:TEW401 1.5 33.6 0.7
O11 A:TEW401 1.8 51.2 0.7
O2 A:TEW401 1.9 36.3 0.7
O1 A:TEW401 2.0 54.7 0.7
O12 A:TEW401 2.1 59.7 0.7
O13 A:TEW401 2.5 71.8 0.7
W2 A:TEW401 3.1 42.6 0.7
O10 A:TEW401 3.1 52.2 0.7
W1 A:TEW401 3.2 54.4 0.7
W4 A:TEW401 3.3 37.7 0.7
W3 A:TEW401 3.3 54.9 0.7
W5 A:TEW401 3.4 50.9 0.7
O3 A:TEW401 3.4 57.6 0.7
W6 A:TEW401 3.4 66.2 0.7
O17 A:TEW401 3.4 40.1 0.7
O14 A:TEW401 3.4 48.8 0.7
O4 A:TEW401 3.5 63.9 0.7
O20 A:TEW401 3.6 60.1 0.7
CB A:ARG116 4.1 39.0 1.0
NE A:ARG116 4.3 54.7 1.0
O A:HOH687 4.3 51.6 1.0
O8 A:TEW401 4.3 63.8 0.7
O6 A:TEW401 4.3 73.9 0.7
O23 A:TEW401 4.5 54.4 0.7
O15 A:TEW401 4.5 65.4 0.7
O19 A:TEW401 4.5 49.6 0.7
CG A:ARG116 4.6 39.9 1.0
O9 A:TEW401 4.6 50.2 0.7
O21 A:TEW401 4.6 52.5 0.7
O5 A:TEW401 4.6 63.5 0.7
O18 A:TEW401 4.6 48.3 0.7
O31 A:TEW401 4.6 60.9 0.7
O16 A:TEW401 4.7 64.8 0.7
O22 A:TEW401 4.7 44.5 0.7
NZ A:LYS149 4.8 66.2 1.0
NH2 A:ARG116 4.9 59.0 1.0

Reference:

C.S.Yang, M.Y.Shie, S.W.Huang, Y.C.Wang, M.H.Hou, C.J.Chen, Y.Chen. Structural Insights Into Signaling Promiscuity of the Cbass Anti-Phage Defense System From A Radiation-Resistant Bacterium. Int.J.Biol.Macromol. V. 295 39534 2025.
ISSN: ISSN 0141-8130
PubMed: 39761885
DOI: 10.1016/J.IJBIOMAC.2025.139534
Page generated: Sun Feb 9 08:49:03 2025

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